PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco021074.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family FAR1
Protein Properties Length: 424aa    MW: 48684.5 Da    PI: 8.026
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco021074.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.45.3e-1431115190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  +fY++Y +e+GF v+k+++k    +g++t     Cs++gk +++ ++    + + +  +t+C a++++  + d+  +++k+ leHnH l+
  Aco021074.1  31 NFYKHYTQELGFGVVKRSTKMI--DGKVTYVVIACSRHGKMHRTVTN---LHPRPSAVKTNCLARINMVINADSSCVISKIILEHNHVLS 115
                  6***************987776..999***************99888...344445679****************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.7E-1131115IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MDEETNYEVR DVNISAPEIG MSFINFEAIF NFYKHYTQEL GFGVVKRSTK MIDGKVTYVV  60
IACSRHGKMH RTVTNLHPRP SAVKTNCLAR INMVINADSS CVISKIILEH NHVLSHYKSR  120
FFPYNRVIDP SVKRRLDLND RAGIRLNKSF NSIAVEVGEY ENLTFGENDA QGLYDPSLLS  180
SSHFPPHTLP TSLLEREEGE EEEKDLAWAW SIPLPFLLLP PCWCLKAWTW SLQRRRSSPF  240
ELGLELLREP SLSLDWKGPS SLLELWKRFL LLRVFRDSGT TLFGETGHYA TVRYLVANIL  300
YDRVAQVNII FSDTEYDCSM DAVTTLLAER FSGDPCDYGI VHSLDDGDYV VFFPSDKKRD  360
KAIRRSPVHS DKLTITAVLW EYNIGQRSHR FRSNYSYLIT LAQNYPVFKR TCHKQSTQKG  420
KTS*
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1605657
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32250.42e-12FAR1-related sequence 2